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Cell Counting and Image Cytometry

Stem Cells

Section
Cellometer Applications
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Cell Counting Method Selection
Cell Counting and Image Cytometry FAQs
Cell-based Assays for Bioprocessing
Cell-based Assays for Gene Therapy Development
Cellometer Applications
Modern Virology Assays
Sub Section
Automated Analysis of Primary Cells
Automated Analysis of Primary Cells
Brightfield Cell Analysis
Cell Analysis for Breweries and Biofuels
Cell Concentration and Viability for Blood-based Samples
Cell Counting with a Hemocytometer
Cell Viability for Clean and Messy Samples
Fluorescent Assays
Immuno-oncology Research Using Cellometer Instruments
Miscellaneous Cell Types
Topic
Stem Cells
Adipocytes
Hepatocytes
Stem Cells
Stromal Vascular Fraction
Trypan Blue vs AO/PI Staining

Introduction to stem cells

The use of primary stem cells has become commonplace in fields such as cancer therapy, regenerative medicine, transplantation and basic oncology research. Although they are widely used, the generated stem cells are a precious commodity in any lab. Because stem cells, whether mesenchymal, embryonic or iPSC, are typically used in downstream experiments examining surface marker expression, cell differentiation and determining therapeutic potential, the initial seeding density, as well as cell sample size, plays an important role in the use of these cells.

The Cellometer line of automated cell counters incorporates image-based cell counting and fluorescence detection in a compact and easy-to-use instrument that reliably automates cell counting, viability determination and other fluorescent assays. By simply pipetting 20µL of sample into a disposable chamber, the Cellometer acquires cell images that are analyzed to determine cell counts, concentration, cell sizes, and fluorescence intensity, typically in 30 seconds or less per sample, The small sample size supports the use of precious, low volume samples such as stem cells. 

Samples can be counted and viability determined with Trypan blue using the brightfield Cellometer cell counter. Fluorescent Cellometer cell counters and image cytometer systems combine brightfield functionality with fluorescent detection to allow stem cell viability determination using fluorescent stains such as propidium iodide, and determination of the concentration of nucleated cells in human bone marrow or cord blood. The fluorescence imaging mode can also be used to quantify GFP transfection efficiency when transfecting stem cells.

Counting of stem cells

Cell images acquired in the brightfield mode are analyzed to determine total cell count. Concentration is automatically calculated, and all data is automatically saved or exported. This reduces user-to-user variability and improves throughput over manual counting methods, especially when analyzing stem cells which can be clumpy or irregularly shaped.
 

Embryonic stem cells

Embryonic Stem Cells
Embryonic Stem Cells

Images of embryonic stem (ES) cells acquired by Cellometer. Green circles indicate cells that have been counted by the Cellometer software.

Irregular & clustered stem cells

Irregular & Clustered Stem Cells
Irregular & Clustered Stem Cells

Cell clusters or irregular shaped cells can be reliably counted. Green circles indicate cells that have been counted by the Cellometer software.

Automated determination of stem cell viability

Stem cell viability can be determined by several methods. Dead cells stained with Trypan blue can be analyzed in the brightfield mode (figure 3). Detecting viability via fluorescent dyes, such as propidium iodide (PI) can be performed by acquiring brightfield images for total cell concentration and fluorescent images to count PI-stained dead cells.
 

Human mesenchymal stem cells

Human Mesenchymal Stem Cells
Human Mesenchymal Stem Cells

Analyzed brightfield images of human mesenchymal stem cells (HMSC) cells show live cells circled in green and trypan blue stained dead cells circled in red.

Mouse embryonic feeder cells

Mouse Embryonic Feeder Cells
Mouse Embryonic Feeder Cells

Brightfield image of Mouse Embryonic Feeder (MEF) cells in the brightfield image, PI-stained dead cells are visible in the fluorescence imaging mode.

Bone marrow stem cells - CD34+

Bone Marrow Stem Cells – CD34+

Images of embryonic stem (ES) cells acquired by the Cellometer. Green circles indicate cells that have been counted by the Cellometer software.

Quantifying GFP transfection efficiency

The brightfield /fluorescent imaging capabilities can also be used to quantify transfection efficiency when using reporter proteins such as GFP, without having to use complex methods, such as flow cytometry. A total count is acquired in the bright field mode, and GFP positive cells are counted in fluorescent mode to calculate the percentage of cells that are expressing GFP.
 

Transfected mouse embryonic feeder cells

Transfected Mouse Embryonic Feeder Cells
Transfected Mouse Embryonic Feeder Cells

Mouse embryonic feeder (MEF) cells that have undergone transfection. Total cell count is determined in the bright field image (left), GFP positive cells are indicated by green circles in the fluorescent image (right).

Example results of stem cells analyzed on Cellometer

Cell type Cell concentration Cell detection / viability
CD 34 + 4.81 x 106/ml PI viability: 74.3%
Mouse embryonic feeder cell (MEF) 5.18 x 105/ml AO or AO/PI
Mouse embryonic feeder cell (MEF) 2.48 x 106/ml Trypan blue viability: 92.1%
Mouse embryonic feeder cell (MEF) 1.06 x 106/ml PI viability: 91.0%
Transfected Mouse embryonic feeder cell (MEF) Total: 3.52 x 106/ml
GFP: 8.24 x 105/ml
GFP
Human mesenchymal stem cells (HMSC) 6.49 x 106/ml Trypan blue viability: 91.4%
Induced pluripotent stem cell (IPS) 7.51 x 105/ml Trypan blue viability: 37.9%
Human cord blood 1.40 x 107/ml AO or AO/PI
Human bone marrow 7.32 x 107/ml AO or AO/PI
Adult cardiac stem cell 3.30 x 105/ml Trypan blue viability: 85.3%
Human embryonic stem cell (HES) 2.38 x 106/ml None
Transfected human embryonic stem cell (HES) 1.23x 106/ml
RFP: 8.32×105/ml
RFP



For research use only. Not for use in diagnostic procedures.

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